细菌微区室

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细菌微区室的结构示意图
化学自营细菌Halothiobacillus neapolitanus的羧酶体(电子显微镜图像),比例尺为100奈米[1]

细菌微区室(英语:Bacterial microcompartment,BMC)是细菌中一种类胞器的结构,为多种蛋白质组成的复合体[2][3][4][5][6],由外层的结构蛋白包裹内部的酵素,外型呈正二十面体或近似正二十面体,直径一般介于40至200奈米之间。微区室外层的结构蛋白有类似膜的功能,将内外物质分隔,并可选择性地让部分物质进出[4][7][8]

羧酶体为最早被发现的细菌微区室,可促进固碳作用的微区室,内含RuBisCO碳酸酐酶两种酵素,此微区室是1950年代研究人员使用电子显微镜观察蓝菌时发现[9],并于1973年被命名[10]。1990年代以前仅知自营细菌具有微区室,随后渐在多种异营细菌中发现参与其他代谢作用的微区室,通称为代谢体(metabolosome)[11][12]。不同种类的细菌微区室中的酵素不同,但外壳结构蛋白相似,一般构成蛋白六聚体(或拟六聚体)后再组成二十面体的外壳。

细菌微区室的功能示意图:(A)自营细菌的羧酶体;(B)异营细菌的代谢体[13]

参见


参考文献

  1. ^ Tsai Y, Sawaya MR, Cannon GC, et al. Structural Analysis of CsoS1A and the Protein Shell of the Halothiobacillus neapolitanus Carboxysome. PLOS Biol. June 2007, 5 (6): e144. PMC 1872035可免费查阅. PMID 17518518. doi:10.1371/journal.pbio.0050144. 
  2. ^ Sutter, Markus; Melnicki, Matthew R.; Schulz, Frederik; Woyke, Tanja; Kerfeld, Cheryl A. A catalog of the diversity and ubiquity of bacterial microcompartments. Nature Communications. December 2021, 12 (1): 3809. Bibcode:2021NatCo..12.3809S. ISSN 2041-1723. PMC 8217296可免费查阅. PMID 34155212. doi:10.1038/s41467-021-24126-4 (英语). 
  3. ^ Cheng, Shouqiang; Liu, Yu; Crowley, Christopher S.; Yeates, Todd O.; Bobik, Thomas A. Bacterial microcompartments: their properties and paradoxes. BioEssays. 2008, 30 (11–12): 1084–1095. ISSN 0265-9247. PMC 3272490可免费查阅. PMID 18937343. doi:10.1002/bies.20830. 
  4. ^ 4.0 4.1 Kerfeld CA, Sawaya MR, Tanaka S, Nguyen CV, Phillips M, Beeby M, Yeates TO. Protein structures forming the shell of primitive bacterial organelles. Science. August 2005, 309 (5736): 936–938. Bibcode:2005Sci...309..936K. CiteSeerX 10.1.1.1026.896可免费查阅. PMID 16081736. S2CID 24561197. doi:10.1126/science.1113397. 
  5. ^ Yeates, Todd O.; Kerfeld, Cheryl A.; Heinhorst, Sabine; Cannon, Gordon C.; Shively, Jessup M. Protein-based organelles in bacteria: carboxysomes and related microcompartments. Nature Reviews Microbiology. 2008, 6 (9): 681–691. ISSN 1740-1526. PMID 18679172. S2CID 22666203. doi:10.1038/nrmicro1913. 
  6. ^ Heinhorst, Sabine; Cannon, Gordon C., Jendrossek, Dieter , 编, Bacterial Microcompartments, Bacterial Organelles and Organelle-like Inclusions 34 (Cham: Springer International Publishing), 2020, 34: 125–147 [2021-09-17], ISBN 978-3-030-60172-0, S2CID 240735306, doi:10.1007/978-3-030-60173-7_6 (英语) 
  7. ^ Kerfeld, Cheryl A.; Erbilgin, Onur. Bacterial microcompartments and the modular construction of microbial metabolism. Trends in Microbiology. 2015, 23 (1): 22–34. ISSN 0966-842X. PMID 25455419. doi:10.1016/j.tim.2014.10.003可免费查阅. 
  8. ^ Kerfeld, Cheryl A.; Heinhorst, Sabine; Cannon, Gordon C. Bacterial Microcompartments. Annual Review of Microbiology (Submitted manuscript). 2010, 64 (1): 391–408 [2022-11-16]. ISSN 0066-4227. PMC 6022854可免费查阅. PMID 20825353. doi:10.1146/annurev.micro.112408.134211. (原始内容存档于2022-11-16). 
  9. ^ G. DREWS & W. NIKLOWITZ. [Cytology of Cyanophycea. II. Centroplasm and granular inclusions of Phormidium uncinatum]. Archiv für Mikrobiologie. 1956, 24 (2): 147–162. PMID 13327992. 
  10. ^ Shively JM, Ball F, Brown DH, Saunders RE. Functional organelles in prokaryotes: polyhedral inclusions (carboxysomes) of Thiobacillus neapolitanus. Science. November 1973, 182 (4112): 584–586. Bibcode:1973Sci...182..584S. PMID 4355679. S2CID 10097616. doi:10.1126/science.182.4112.584. 
  11. ^ P. Chen, D. I. Andersson & J. R. Roth. The control region of the pdu/cob regulon in Salmonella typhimurium. Journal of Bacteriology. September 1994, 176 (17): 5474–5482. PMC 196736可免费查阅. PMID 8071226. doi:10.1128/jb.176.17.5474-5482.1994. 
  12. ^ Brinsmade, S. R.; Paldon, T.; Escalante-Semerena, J. C. Minimal Functions and Physiological Conditions Required for Growth of Salmonella enterica on Ethanolamine in the Absence of the Metabolosome. Journal of Bacteriology. 2005, 187 (23): 8039–8046. ISSN 0021-9193. PMC 1291257可免费查阅. PMID 16291677. doi:10.1128/JB.187.23.8039-8046.2005. 
  13. ^ Axen, Seth D.; Erbilgin, Onur; Kerfeld, Cheryl A. A Taxonomy of Bacterial Microcompartment Loci Constructed by a Novel Scoring Method. PLOS Computational Biology. 2014, 10 (10): e1003898. Bibcode:2014PLSCB..10E3898A. ISSN 1553-7358. PMC 4207490可免费查阅. PMID 25340524. doi:10.1371/journal.pcbi.1003898. 
  14. ^ Sutter, Markus; Boehringer, Daniel; Gutmann, Sascha; Günther, Susanne; Prangishvili, David; Loessner, Martin J; Stetter, Karl O; Weber-Ban, Eilika; Ban, Nenad. Structural basis of enzyme encapsulation into a bacterial nanocompartment. Nature Structural & Molecular Biology. 2008, 15 (9): 939–947. ISSN 1545-9993. PMID 19172747. S2CID 205522743. doi:10.1038/nsmb.1473. hdl:20.500.11850/150838可免费查阅. 
  15. ^ Pfeifer, Felicitas. Distribution, formation and regulation of gas vesicles. Nature Reviews Microbiology. 2012, 10 (10): 705–715. ISSN 1740-1526. PMID 22941504. S2CID 9926129. doi:10.1038/nrmicro2834.